CDS

Accession Number TCMCG057C56204
gbkey CDS
Protein Id XP_018462307.1
Location join(7154..7456,7567..7739,7839..7911,7979..8113,8185..8395,8480..8628,8767..8865,8943..9012,9127..9262,9351..9445,9535..9643,9759..9924,10010..10171,10245..10404,10482..10645,10762..10806)
Gene LOC108833383
GeneID 108833383
Organism Raphanus sativus

Protein

Length 749aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018606805.1
Definition PREDICTED: DNA mismatch repair protein MLH1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein Mlh1 C-terminus
KEGG_TC -
KEGG_Module M00295        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08734        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01524        [VIEW IN KEGG]
ko03430        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05210        [VIEW IN KEGG]
ko05213        [VIEW IN KEGG]
ko05226        [VIEW IN KEGG]
map01524        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05210        [VIEW IN KEGG]
map05213        [VIEW IN KEGG]
map05226        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0002200        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002377        [VIEW IN EMBL-EBI]
GO:0002440        [VIEW IN EMBL-EBI]
GO:0002520        [VIEW IN EMBL-EBI]
GO:0002566        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005712        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006312        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0016445        [VIEW IN EMBL-EBI]
GO:0016446        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032300        [VIEW IN EMBL-EBI]
GO:0032389        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTTCCCGACGGTTCGCCTCTTACGGTGGCGATGGAGGAGGAAGAGTATACTGCCATATCCATGGATGTAGAAGAGTCTCCGTCTCCGTCAATTACACCGAGAGACCCGCCGAAGATACAACGGCTAGAAGAGTCAGTGGTGAACCGTATCGCAGCGGGCGAAGTAATCCAGCGTCCAGTTTCGGCGGTTAAGGAGCTCGTCGAGAATAGCCTCGACGCCGACTCAACCTCCATAAACGTCACTGTTAAGGACGGTGGATTGAAGCTAATTCAAGTCTCCGACGACGGTCACGGCATTAGACGTGAAGACTTACCGATTCTATGCGAGAGACATACAACGTCGAAGCTGAGCAAGTATGAAGATTTGTTCTCTCTTAGTTCGATGGGTTTTAGAGGAGAGGCACTTGCTAGTATGACTTATGTTGCTCATGTTACTGTTACCACCATTACCAAAGGCCAGATTCATGGTCACAGAGTGTCTTACAGAGATGGTGTTATGGAGCATGAACCAAAGGCTTGTGCGGCTGTCAAAGGAACGCAGATAATGGTGGAGAATTTGTTTTATAATATGATTGCTAGAAGGAAGACACTTCAAAACTCTGCTGATGATTATGGAAAAATAGTTGATTTGCTGAGCCGGATGGCCATTCATCACAATAACGTTAGCTTCTCTTGTCGAAAGCATGGAGCTGTCAAGGCTGATGTTCACTCTGTGGTGTCGTCTTCAAGGCTTGATTCAATCAGATCAGTCTACGGTGTGTCAGTTGCGAAGAACTTGATTAAAGTAGAAGTCTCCTCCGGTGAATCCTCCGGTTGTGCTTTTGATATGGAAGGTTTCGTATCCAATTCGAACTATGTTGCTAAGAAGACCATATTGGTGCTTTTCATTAATGATAGATTGGTGGAATGTTCGGCTTTAAAAAGAGCCATTGAGATTGTTTATGCTGCAACATTACCAAAAGCATCGAAACCTTTTGTCTACATGTCGATCAATTTGCCACGTGAACATGTTGATATCAATATTCACCCAACAAAGAAAGAGGTAAGCCTTTTAAACCAGGAAATCATGATCGAGATGATACAGTCAGAGGTTGAACTCAAACTGAGGAACACAAATGACACTAGGACGTTTCAAGAGCAGAAAGTGGAGTACATTCAATCTACGTTGAAATCTTCGAGAAGTGACACTCCAGTTTCTCCGCTTCCATCTGGACAGAAAACACCGAAAGTTCCTGTGCATAAAATGGTGAGAACGGATTCATCAGATCCAGCTGGAAGGCTACATGCGTTTTTGCAACCCAAGCCCCATAATCTACCTGACAATGTTTCTAGTTTGAGTGCAGTGAGATCTTCTATAAGACAAAGAAGAAACCCAAAGGAAACTGCTGATCTTTCTAGTGTCCAGGAACTTCTTTCTGGAGTTGACAGCTGCTGCCATCCTGGTTTGCTGGAGACTGTACGGAATTGCACATATGTTGGAATGGCAGATGATGTTTTCGCTTTAGTTCAGTATCAAACACATCTATATCTAGCAAATGTGGTGAACCTCAGCAAGGAGCTCATGTATCAGCAAACCCTTCGTCGTTTTGCTCATTTTAATGCAATACAGCTTAGCGATCCAGCTCCTCTGTCTGAGTTGATACTGTTGGCTCTGCAAGAGGAGGATCTAGATCCTGAAAATTACGAAAAAGATCATCTCAAAGAAAGAATTGCTGAAATGAATACAGAACTCCTTAAAGAACAAACGGAAATGTTAGAGGAGTATTTCAGCGTTTTCATTGATTCCGATGGGAATTTGTCACAGCTTCCTGTCATACTCGACCAGTATACACCTGACATGGATCGTGTTCCTGAGTTTTTACTATGCTTGGGAAATGATGTTGAATGGGAAGATGAGAGGGCTTGCTTTCAAGGAGTTTCTGCAGCTATTGGGAATTTTTACGCCATGCATCCTCCTCTTTTGCCAAACCCATCTGGGGACGGTATTCGGTTCTATACCAAGACAAGTGAGAAGAGCCCTCAGGAGAATCCAGCTTTGGGGGGTAACGTCGAGATGGAGTCGGTTCTTGACCAAGACCTTCTCTCAGATGCTGAAAACGCATGGGCACAACGTGAATGGTCAATCCAACACGTGCTGTTTCCGTCTATGAGATTGTTCTTGAAACCACCAGCCTCTATGGCTTCAAATGGAACTTTTGTTAAGGTAGCATCCCTTGAAAAGCTGTACAAGATCTTCGAACGGTGCTAA
Protein:  
MFPDGSPLTVAMEEEEYTAISMDVEESPSPSITPRDPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSTSINVTVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLSKYEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQIHGHRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKTLQNSADDYGKIVDLLSRMAIHHNNVSFSCRKHGAVKADVHSVVSSSRLDSIRSVYGVSVAKNLIKVEVSSGESSGCAFDMEGFVSNSNYVAKKTILVLFINDRLVECSALKRAIEIVYAATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIMIEMIQSEVELKLRNTNDTRTFQEQKVEYIQSTLKSSRSDTPVSPLPSGQKTPKVPVHKMVRTDSSDPAGRLHAFLQPKPHNLPDNVSSLSAVRSSIRQRRNPKETADLSSVQELLSGVDSCCHPGLLETVRNCTYVGMADDVFALVQYQTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSELILLALQEEDLDPENYEKDHLKERIAEMNTELLKEQTEMLEEYFSVFIDSDGNLSQLPVILDQYTPDMDRVPEFLLCLGNDVEWEDERACFQGVSAAIGNFYAMHPPLLPNPSGDGIRFYTKTSEKSPQENPALGGNVEMESVLDQDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPASMASNGTFVKVASLEKLYKIFERC